Morphometric and molecular discrimination of the sugarcane aphid, Melanaphis sacchari, (Zehntner, 1897) and the sorghum aphid Melanaphis sorghi (Theobald, 1904)

Melanaphis sacchari (Zehntner, 1897) and Melanaphis sorghi (Theobald, 1904) are major worldwide crop pests causing direct feeding damage on sorghum and transmitting viruses to sugarcane. It is common in the scientific literature to consider these two species as synonyms, referred to as the 'sugarcane aphid', although no formal study has validated this synonymy. In this study, based on the comparison of samples collected from their whole distribution area, we use both morphometric and molecular data to better characterize the discrimination between M. sacchari and M. sorghi. An unsupervised multivariate analysis of morphometric data clearly confirmed the separation of the two species. The best discriminating characters separating these species were length of the antenna processus terminalis relative to length of hind tibia, siphunculus or cauda. However, those criteria sometimes do not allow an unambiguous identification. Bayesian clustering based on microsatellite data delimited two clusters, which corresponded to the morphological species separation. The DNA sequencing of three nuclear and three mitochondrial regions revealed slight divergence between species. In particular, the COI barcode region proved to be uninformative for species separation because one haplotype is shared by both species. In contrast, one SNP located on the nuclear EF1-α gene was diagnostic for species separation. Based on morphological and molecular evidence, the invasive genotype damaging to sorghum in the US, Mexico and the Caribbean since 2013 is found to be M. sorghi.

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Bibliographic Details
Main Authors: Nibouche, Samuel, Costet, Laurent, Medina, Raul F., Holt, Jocelyn R., Sadeyen, Joëlle, Zoogones, Anne-Sophie, Brown, Paul, Blackman, Roger L.
Format: article biblioteca
Language:eng
Subjects:H10 - Ravageurs des plantes, H50 - Troubles divers des plantes, ravageur des plantes, taxonomie, insecte nuisible, morphologie animale, distribution des populations, Aphididae, Saccharum officinarum, Sorghum, analyse discriminante, http://aims.fao.org/aos/agrovoc/c_16196, http://aims.fao.org/aos/agrovoc/c_7631, http://aims.fao.org/aos/agrovoc/c_5729, http://aims.fao.org/aos/agrovoc/c_421, http://aims.fao.org/aos/agrovoc/c_6113, http://aims.fao.org/aos/agrovoc/c_525, http://aims.fao.org/aos/agrovoc/c_6727, http://aims.fao.org/aos/agrovoc/c_7244, http://aims.fao.org/aos/agrovoc/c_28859,
Online Access:http://agritrop.cirad.fr/597964/
http://agritrop.cirad.fr/597964/1/Nibouche%20et%20al.%202021.pdf
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spelling dig-cirad-fr-5979642024-04-24T11:50:48Z http://agritrop.cirad.fr/597964/ http://agritrop.cirad.fr/597964/ Morphometric and molecular discrimination of the sugarcane aphid, Melanaphis sacchari, (Zehntner, 1897) and the sorghum aphid Melanaphis sorghi (Theobald, 1904). Nibouche Samuel, Costet Laurent, Medina Raul F., Holt Jocelyn R., Sadeyen Joëlle, Zoogones Anne-Sophie, Brown Paul, Blackman Roger L.. 2021. PloS One, 16 (3):e0241881, 17 p.https://doi.org/10.1371/journal.pone.0241881 <https://doi.org/10.1371/journal.pone.0241881> Morphometric and molecular discrimination of the sugarcane aphid, Melanaphis sacchari, (Zehntner, 1897) and the sorghum aphid Melanaphis sorghi (Theobald, 1904) Nibouche, Samuel Costet, Laurent Medina, Raul F. Holt, Jocelyn R. Sadeyen, Joëlle Zoogones, Anne-Sophie Brown, Paul Blackman, Roger L. eng 2021 PloS One H10 - Ravageurs des plantes H50 - Troubles divers des plantes ravageur des plantes taxonomie insecte nuisible morphologie animale distribution des populations Aphididae Saccharum officinarum Sorghum analyse discriminante http://aims.fao.org/aos/agrovoc/c_16196 http://aims.fao.org/aos/agrovoc/c_7631 http://aims.fao.org/aos/agrovoc/c_5729 http://aims.fao.org/aos/agrovoc/c_421 http://aims.fao.org/aos/agrovoc/c_6113 http://aims.fao.org/aos/agrovoc/c_525 http://aims.fao.org/aos/agrovoc/c_6727 http://aims.fao.org/aos/agrovoc/c_7244 http://aims.fao.org/aos/agrovoc/c_28859 Melanaphis sacchari (Zehntner, 1897) and Melanaphis sorghi (Theobald, 1904) are major worldwide crop pests causing direct feeding damage on sorghum and transmitting viruses to sugarcane. It is common in the scientific literature to consider these two species as synonyms, referred to as the 'sugarcane aphid', although no formal study has validated this synonymy. In this study, based on the comparison of samples collected from their whole distribution area, we use both morphometric and molecular data to better characterize the discrimination between M. sacchari and M. sorghi. An unsupervised multivariate analysis of morphometric data clearly confirmed the separation of the two species. The best discriminating characters separating these species were length of the antenna processus terminalis relative to length of hind tibia, siphunculus or cauda. However, those criteria sometimes do not allow an unambiguous identification. Bayesian clustering based on microsatellite data delimited two clusters, which corresponded to the morphological species separation. The DNA sequencing of three nuclear and three mitochondrial regions revealed slight divergence between species. In particular, the COI barcode region proved to be uninformative for species separation because one haplotype is shared by both species. In contrast, one SNP located on the nuclear EF1-α gene was diagnostic for species separation. Based on morphological and molecular evidence, the invasive genotype damaging to sorghum in the US, Mexico and the Caribbean since 2013 is found to be M. sorghi. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/597964/1/Nibouche%20et%20al.%202021.pdf text cc_by info:eu-repo/semantics/openAccess https://creativecommons.org/licenses/by/4.0/ https://doi.org/10.1371/journal.pone.0241881 10.1371/journal.pone.0241881 info:eu-repo/semantics/altIdentifier/doi/10.1371/journal.pone.0241881 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1371/journal.pone.0241881 info:eu-repo/semantics/reference/purl/https://doi.org/10.18167/DVN1/PDPDS4 info:eu-repo/semantics/reference/purl/https://github.com/SamNibouche/Melanaphis_taxonomy info:eu-repo/semantics/dataset/purl/http://arthemisdb.supagro.inra.fr/ info:eu-repo/grantAgreement/EC/////
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic H10 - Ravageurs des plantes
H50 - Troubles divers des plantes
ravageur des plantes
taxonomie
insecte nuisible
morphologie animale
distribution des populations
Aphididae
Saccharum officinarum
Sorghum
analyse discriminante
http://aims.fao.org/aos/agrovoc/c_16196
http://aims.fao.org/aos/agrovoc/c_7631
http://aims.fao.org/aos/agrovoc/c_5729
http://aims.fao.org/aos/agrovoc/c_421
http://aims.fao.org/aos/agrovoc/c_6113
http://aims.fao.org/aos/agrovoc/c_525
http://aims.fao.org/aos/agrovoc/c_6727
http://aims.fao.org/aos/agrovoc/c_7244
http://aims.fao.org/aos/agrovoc/c_28859
H10 - Ravageurs des plantes
H50 - Troubles divers des plantes
ravageur des plantes
taxonomie
insecte nuisible
morphologie animale
distribution des populations
Aphididae
Saccharum officinarum
Sorghum
analyse discriminante
http://aims.fao.org/aos/agrovoc/c_16196
http://aims.fao.org/aos/agrovoc/c_7631
http://aims.fao.org/aos/agrovoc/c_5729
http://aims.fao.org/aos/agrovoc/c_421
http://aims.fao.org/aos/agrovoc/c_6113
http://aims.fao.org/aos/agrovoc/c_525
http://aims.fao.org/aos/agrovoc/c_6727
http://aims.fao.org/aos/agrovoc/c_7244
http://aims.fao.org/aos/agrovoc/c_28859
spellingShingle H10 - Ravageurs des plantes
H50 - Troubles divers des plantes
ravageur des plantes
taxonomie
insecte nuisible
morphologie animale
distribution des populations
Aphididae
Saccharum officinarum
Sorghum
analyse discriminante
http://aims.fao.org/aos/agrovoc/c_16196
http://aims.fao.org/aos/agrovoc/c_7631
http://aims.fao.org/aos/agrovoc/c_5729
http://aims.fao.org/aos/agrovoc/c_421
http://aims.fao.org/aos/agrovoc/c_6113
http://aims.fao.org/aos/agrovoc/c_525
http://aims.fao.org/aos/agrovoc/c_6727
http://aims.fao.org/aos/agrovoc/c_7244
http://aims.fao.org/aos/agrovoc/c_28859
H10 - Ravageurs des plantes
H50 - Troubles divers des plantes
ravageur des plantes
taxonomie
insecte nuisible
morphologie animale
distribution des populations
Aphididae
Saccharum officinarum
Sorghum
analyse discriminante
http://aims.fao.org/aos/agrovoc/c_16196
http://aims.fao.org/aos/agrovoc/c_7631
http://aims.fao.org/aos/agrovoc/c_5729
http://aims.fao.org/aos/agrovoc/c_421
http://aims.fao.org/aos/agrovoc/c_6113
http://aims.fao.org/aos/agrovoc/c_525
http://aims.fao.org/aos/agrovoc/c_6727
http://aims.fao.org/aos/agrovoc/c_7244
http://aims.fao.org/aos/agrovoc/c_28859
Nibouche, Samuel
Costet, Laurent
Medina, Raul F.
Holt, Jocelyn R.
Sadeyen, Joëlle
Zoogones, Anne-Sophie
Brown, Paul
Blackman, Roger L.
Morphometric and molecular discrimination of the sugarcane aphid, Melanaphis sacchari, (Zehntner, 1897) and the sorghum aphid Melanaphis sorghi (Theobald, 1904)
description Melanaphis sacchari (Zehntner, 1897) and Melanaphis sorghi (Theobald, 1904) are major worldwide crop pests causing direct feeding damage on sorghum and transmitting viruses to sugarcane. It is common in the scientific literature to consider these two species as synonyms, referred to as the 'sugarcane aphid', although no formal study has validated this synonymy. In this study, based on the comparison of samples collected from their whole distribution area, we use both morphometric and molecular data to better characterize the discrimination between M. sacchari and M. sorghi. An unsupervised multivariate analysis of morphometric data clearly confirmed the separation of the two species. The best discriminating characters separating these species were length of the antenna processus terminalis relative to length of hind tibia, siphunculus or cauda. However, those criteria sometimes do not allow an unambiguous identification. Bayesian clustering based on microsatellite data delimited two clusters, which corresponded to the morphological species separation. The DNA sequencing of three nuclear and three mitochondrial regions revealed slight divergence between species. In particular, the COI barcode region proved to be uninformative for species separation because one haplotype is shared by both species. In contrast, one SNP located on the nuclear EF1-α gene was diagnostic for species separation. Based on morphological and molecular evidence, the invasive genotype damaging to sorghum in the US, Mexico and the Caribbean since 2013 is found to be M. sorghi.
format article
topic_facet H10 - Ravageurs des plantes
H50 - Troubles divers des plantes
ravageur des plantes
taxonomie
insecte nuisible
morphologie animale
distribution des populations
Aphididae
Saccharum officinarum
Sorghum
analyse discriminante
http://aims.fao.org/aos/agrovoc/c_16196
http://aims.fao.org/aos/agrovoc/c_7631
http://aims.fao.org/aos/agrovoc/c_5729
http://aims.fao.org/aos/agrovoc/c_421
http://aims.fao.org/aos/agrovoc/c_6113
http://aims.fao.org/aos/agrovoc/c_525
http://aims.fao.org/aos/agrovoc/c_6727
http://aims.fao.org/aos/agrovoc/c_7244
http://aims.fao.org/aos/agrovoc/c_28859
author Nibouche, Samuel
Costet, Laurent
Medina, Raul F.
Holt, Jocelyn R.
Sadeyen, Joëlle
Zoogones, Anne-Sophie
Brown, Paul
Blackman, Roger L.
author_facet Nibouche, Samuel
Costet, Laurent
Medina, Raul F.
Holt, Jocelyn R.
Sadeyen, Joëlle
Zoogones, Anne-Sophie
Brown, Paul
Blackman, Roger L.
author_sort Nibouche, Samuel
title Morphometric and molecular discrimination of the sugarcane aphid, Melanaphis sacchari, (Zehntner, 1897) and the sorghum aphid Melanaphis sorghi (Theobald, 1904)
title_short Morphometric and molecular discrimination of the sugarcane aphid, Melanaphis sacchari, (Zehntner, 1897) and the sorghum aphid Melanaphis sorghi (Theobald, 1904)
title_full Morphometric and molecular discrimination of the sugarcane aphid, Melanaphis sacchari, (Zehntner, 1897) and the sorghum aphid Melanaphis sorghi (Theobald, 1904)
title_fullStr Morphometric and molecular discrimination of the sugarcane aphid, Melanaphis sacchari, (Zehntner, 1897) and the sorghum aphid Melanaphis sorghi (Theobald, 1904)
title_full_unstemmed Morphometric and molecular discrimination of the sugarcane aphid, Melanaphis sacchari, (Zehntner, 1897) and the sorghum aphid Melanaphis sorghi (Theobald, 1904)
title_sort morphometric and molecular discrimination of the sugarcane aphid, melanaphis sacchari, (zehntner, 1897) and the sorghum aphid melanaphis sorghi (theobald, 1904)
url http://agritrop.cirad.fr/597964/
http://agritrop.cirad.fr/597964/1/Nibouche%20et%20al.%202021.pdf
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