QTL evolution under natural infection using a F2 Scavina-6 x ICS1 population for witches'broom resistance in Bahia, Brazil

Studies to determine the genetic bases to witches´ broom resistance were being carried out in order to identify different genetic sources of resistance and to improve the efficiency of selection using molecular markers. Scavina-6, particularly in the cocoa producing region of the Bahia state in Brazil, was initially the main resistance source. A major QTL of resistance was detected in the linkage group 9 from a F2 Scavina 6 x ICS1 progenies (Brown et al 2005 and Faleiro et al 2006). Observations related with the number of vegetative brooms and flower cushions brooms, were carried out on143 individuals replicated three times by grafting on CEPLAC-hybrids and observed over a period between 2003 and 2008. Analyses were made with SAS, mainly to adjust phenotypic values (number of brooms ) by a regression taking into account the difference of the section of each plant (vigor was made in 2008 assessing the section of the grafted portion). QTLs analyses were carried out with MapQTL.5 software. We confirm the presence of the previous QTL located in the LG9 around the mTcCIR35 marker. However, the LOD score and the percentage of variation explained by the QTL significantly decrease over time and change its position into the confidence interval. During this new period of evaluation of the disease in the field, others QTLs of resistance were also detected. The QTLs values related to these others significant QTLs of the resistance to WBD and to a QTL involved in the vigor were also presented. This result suggests a change in the relationship between the host and the pathogen.

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Main Authors: Clément, Didier, Pires, José Luis, Gramacho, Karina Peres, Juca, F.F., Melo, G.R.P., Lopes, Uilson Vanderlei
Format: conference_item biblioteca
Language:eng
Published: s.n.
Subjects:F30 - Génétique et amélioration des plantes, H20 - Maladies des plantes,
Online Access:http://agritrop.cirad.fr/568320/
http://agritrop.cirad.fr/568320/1/document_568320.pdf
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spelling dig-cirad-fr-5683202022-03-30T14:45:13Z http://agritrop.cirad.fr/568320/ http://agritrop.cirad.fr/568320/ QTL evolution under natural infection using a F2 Scavina-6 x ICS1 population for witches'broom resistance in Bahia, Brazil. Clément Didier, Pires José Luis, Gramacho Karina Peres, Juca F.F., Melo G.R.P., Lopes Uilson Vanderlei. 2012. In : 17th Conférence Internationale sur la Recherche Cacaoyère, Yaounde, Cameroun, 15 - 20 Octobre 2012. COPAL. s.l. : s.n., 8 p. Conférence Internationale sur la Recherche Cacaoyère. 17, Yaoundé, Cameroun, 15 Octobre 2012/20 Octobre 2012. Researchers QTL evolution under natural infection using a F2 Scavina-6 x ICS1 population for witches'broom resistance in Bahia, Brazil Clément, Didier Pires, José Luis Gramacho, Karina Peres Juca, F.F. Melo, G.R.P. Lopes, Uilson Vanderlei eng 2012 s.n. 17th Conférence Internationale sur la Recherche Cacaoyère, Yaounde, Cameroun, 15 - 20 Octobre 2012 F30 - Génétique et amélioration des plantes H20 - Maladies des plantes Studies to determine the genetic bases to witches´ broom resistance were being carried out in order to identify different genetic sources of resistance and to improve the efficiency of selection using molecular markers. Scavina-6, particularly in the cocoa producing region of the Bahia state in Brazil, was initially the main resistance source. A major QTL of resistance was detected in the linkage group 9 from a F2 Scavina 6 x ICS1 progenies (Brown et al 2005 and Faleiro et al 2006). Observations related with the number of vegetative brooms and flower cushions brooms, were carried out on143 individuals replicated three times by grafting on CEPLAC-hybrids and observed over a period between 2003 and 2008. Analyses were made with SAS, mainly to adjust phenotypic values (number of brooms ) by a regression taking into account the difference of the section of each plant (vigor was made in 2008 assessing the section of the grafted portion). QTLs analyses were carried out with MapQTL.5 software. We confirm the presence of the previous QTL located in the LG9 around the mTcCIR35 marker. However, the LOD score and the percentage of variation explained by the QTL significantly decrease over time and change its position into the confidence interval. During this new period of evaluation of the disease in the field, others QTLs of resistance were also detected. The QTLs values related to these others significant QTLs of the resistance to WBD and to a QTL involved in the vigor were also presented. This result suggests a change in the relationship between the host and the pathogen. conference_item info:eu-repo/semantics/conferenceObject Conference info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/568320/1/document_568320.pdf application/pdf Cirad license info:eu-repo/semantics/openAccess https://agritrop.cirad.fr/mention_legale.html
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic F30 - Génétique et amélioration des plantes
H20 - Maladies des plantes
F30 - Génétique et amélioration des plantes
H20 - Maladies des plantes
spellingShingle F30 - Génétique et amélioration des plantes
H20 - Maladies des plantes
F30 - Génétique et amélioration des plantes
H20 - Maladies des plantes
Clément, Didier
Pires, José Luis
Gramacho, Karina Peres
Juca, F.F.
Melo, G.R.P.
Lopes, Uilson Vanderlei
QTL evolution under natural infection using a F2 Scavina-6 x ICS1 population for witches'broom resistance in Bahia, Brazil
description Studies to determine the genetic bases to witches´ broom resistance were being carried out in order to identify different genetic sources of resistance and to improve the efficiency of selection using molecular markers. Scavina-6, particularly in the cocoa producing region of the Bahia state in Brazil, was initially the main resistance source. A major QTL of resistance was detected in the linkage group 9 from a F2 Scavina 6 x ICS1 progenies (Brown et al 2005 and Faleiro et al 2006). Observations related with the number of vegetative brooms and flower cushions brooms, were carried out on143 individuals replicated three times by grafting on CEPLAC-hybrids and observed over a period between 2003 and 2008. Analyses were made with SAS, mainly to adjust phenotypic values (number of brooms ) by a regression taking into account the difference of the section of each plant (vigor was made in 2008 assessing the section of the grafted portion). QTLs analyses were carried out with MapQTL.5 software. We confirm the presence of the previous QTL located in the LG9 around the mTcCIR35 marker. However, the LOD score and the percentage of variation explained by the QTL significantly decrease over time and change its position into the confidence interval. During this new period of evaluation of the disease in the field, others QTLs of resistance were also detected. The QTLs values related to these others significant QTLs of the resistance to WBD and to a QTL involved in the vigor were also presented. This result suggests a change in the relationship between the host and the pathogen.
format conference_item
topic_facet F30 - Génétique et amélioration des plantes
H20 - Maladies des plantes
author Clément, Didier
Pires, José Luis
Gramacho, Karina Peres
Juca, F.F.
Melo, G.R.P.
Lopes, Uilson Vanderlei
author_facet Clément, Didier
Pires, José Luis
Gramacho, Karina Peres
Juca, F.F.
Melo, G.R.P.
Lopes, Uilson Vanderlei
author_sort Clément, Didier
title QTL evolution under natural infection using a F2 Scavina-6 x ICS1 population for witches'broom resistance in Bahia, Brazil
title_short QTL evolution under natural infection using a F2 Scavina-6 x ICS1 population for witches'broom resistance in Bahia, Brazil
title_full QTL evolution under natural infection using a F2 Scavina-6 x ICS1 population for witches'broom resistance in Bahia, Brazil
title_fullStr QTL evolution under natural infection using a F2 Scavina-6 x ICS1 population for witches'broom resistance in Bahia, Brazil
title_full_unstemmed QTL evolution under natural infection using a F2 Scavina-6 x ICS1 population for witches'broom resistance in Bahia, Brazil
title_sort qtl evolution under natural infection using a f2 scavina-6 x ics1 population for witches'broom resistance in bahia, brazil
publisher s.n.
url http://agritrop.cirad.fr/568320/
http://agritrop.cirad.fr/568320/1/document_568320.pdf
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