Assessment of RAPD markers to detect genetic change in protoplast-derived rice plants

Fourteen different primers were used to amplify DNA from selfed progenies of 117 diploid plants regenerated from haploid cell suspension protoplast of rice (cv. Miara). This survey, which permitted to generate 69 different major fragments in control Miara plants as well as in protoclone DNA, did not reveal genetic change among protoclones compared to the donor variety except independent amplification of an additional fragment in nearly half of the lines by two 10-mers. This polymorphism in the protoclonal population was attributed to natural intravarietal variation among the donor plants which have been collected to establish the microscope-callus suspension culture. However, polymorphism could not be detected in calluses grown from cell clumps collected in the 21-month old cell suspension. This apparent lack of tissue culture-induced polymorphism at the molecular level contrasts with the results of a previous field evaluation of the progenies which exhibited both wide range and high frequency morphological changes. These observations highlight the absence of apparent relationship between morphological variation and molecular changes. The interest of RAPDs as a convenient method to test genetic integrity of the regenerants, that would preclude the need for further field evaluation, is discussed.

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Main Authors: Mezencev, N., Ghesquière, Alain, Marney, P., Combes, Marie-Christine, Guiderdoni, Emmanuel
Format: article biblioteca
Language:eng
Subjects:F30 - Génétique et amélioration des plantes, Oryza, marqueur génétique, RAPD, adn, fusion de protoplastes, http://aims.fao.org/aos/agrovoc/c_5435, http://aims.fao.org/aos/agrovoc/c_24030, http://aims.fao.org/aos/agrovoc/c_36341, http://aims.fao.org/aos/agrovoc/c_2347, http://aims.fao.org/aos/agrovoc/c_24888,
Online Access:http://agritrop.cirad.fr/389797/
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spelling dig-cirad-fr-3897972024-01-27T23:04:38Z http://agritrop.cirad.fr/389797/ http://agritrop.cirad.fr/389797/ Assessment of RAPD markers to detect genetic change in protoplast-derived rice plants. Mezencev N., Ghesquière Alain, Marney P., Combes Marie-Christine, Guiderdoni Emmanuel. 1997. Journal of Genetics and Breeding, 51 (2) : 97-102. Assessment of RAPD markers to detect genetic change in protoplast-derived rice plants Mezencev, N. Ghesquière, Alain Marney, P. Combes, Marie-Christine Guiderdoni, Emmanuel eng 1997 Journal of Genetics and Breeding F30 - Génétique et amélioration des plantes Oryza marqueur génétique RAPD adn fusion de protoplastes http://aims.fao.org/aos/agrovoc/c_5435 http://aims.fao.org/aos/agrovoc/c_24030 http://aims.fao.org/aos/agrovoc/c_36341 http://aims.fao.org/aos/agrovoc/c_2347 http://aims.fao.org/aos/agrovoc/c_24888 Fourteen different primers were used to amplify DNA from selfed progenies of 117 diploid plants regenerated from haploid cell suspension protoplast of rice (cv. Miara). This survey, which permitted to generate 69 different major fragments in control Miara plants as well as in protoclone DNA, did not reveal genetic change among protoclones compared to the donor variety except independent amplification of an additional fragment in nearly half of the lines by two 10-mers. This polymorphism in the protoclonal population was attributed to natural intravarietal variation among the donor plants which have been collected to establish the microscope-callus suspension culture. However, polymorphism could not be detected in calluses grown from cell clumps collected in the 21-month old cell suspension. This apparent lack of tissue culture-induced polymorphism at the molecular level contrasts with the results of a previous field evaluation of the progenies which exhibited both wide range and high frequency morphological changes. These observations highlight the absence of apparent relationship between morphological variation and molecular changes. The interest of RAPDs as a convenient method to test genetic integrity of the regenerants, that would preclude the need for further field evaluation, is discussed. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/closedAccess http://catalogue-bibliotheques.cirad.fr/cgi-bin/koha/opac-detail.pl?biblionumber=89505
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic F30 - Génétique et amélioration des plantes
Oryza
marqueur génétique
RAPD
adn
fusion de protoplastes
http://aims.fao.org/aos/agrovoc/c_5435
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_36341
http://aims.fao.org/aos/agrovoc/c_2347
http://aims.fao.org/aos/agrovoc/c_24888
F30 - Génétique et amélioration des plantes
Oryza
marqueur génétique
RAPD
adn
fusion de protoplastes
http://aims.fao.org/aos/agrovoc/c_5435
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_36341
http://aims.fao.org/aos/agrovoc/c_2347
http://aims.fao.org/aos/agrovoc/c_24888
spellingShingle F30 - Génétique et amélioration des plantes
Oryza
marqueur génétique
RAPD
adn
fusion de protoplastes
http://aims.fao.org/aos/agrovoc/c_5435
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_36341
http://aims.fao.org/aos/agrovoc/c_2347
http://aims.fao.org/aos/agrovoc/c_24888
F30 - Génétique et amélioration des plantes
Oryza
marqueur génétique
RAPD
adn
fusion de protoplastes
http://aims.fao.org/aos/agrovoc/c_5435
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_36341
http://aims.fao.org/aos/agrovoc/c_2347
http://aims.fao.org/aos/agrovoc/c_24888
Mezencev, N.
Ghesquière, Alain
Marney, P.
Combes, Marie-Christine
Guiderdoni, Emmanuel
Assessment of RAPD markers to detect genetic change in protoplast-derived rice plants
description Fourteen different primers were used to amplify DNA from selfed progenies of 117 diploid plants regenerated from haploid cell suspension protoplast of rice (cv. Miara). This survey, which permitted to generate 69 different major fragments in control Miara plants as well as in protoclone DNA, did not reveal genetic change among protoclones compared to the donor variety except independent amplification of an additional fragment in nearly half of the lines by two 10-mers. This polymorphism in the protoclonal population was attributed to natural intravarietal variation among the donor plants which have been collected to establish the microscope-callus suspension culture. However, polymorphism could not be detected in calluses grown from cell clumps collected in the 21-month old cell suspension. This apparent lack of tissue culture-induced polymorphism at the molecular level contrasts with the results of a previous field evaluation of the progenies which exhibited both wide range and high frequency morphological changes. These observations highlight the absence of apparent relationship between morphological variation and molecular changes. The interest of RAPDs as a convenient method to test genetic integrity of the regenerants, that would preclude the need for further field evaluation, is discussed.
format article
topic_facet F30 - Génétique et amélioration des plantes
Oryza
marqueur génétique
RAPD
adn
fusion de protoplastes
http://aims.fao.org/aos/agrovoc/c_5435
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_36341
http://aims.fao.org/aos/agrovoc/c_2347
http://aims.fao.org/aos/agrovoc/c_24888
author Mezencev, N.
Ghesquière, Alain
Marney, P.
Combes, Marie-Christine
Guiderdoni, Emmanuel
author_facet Mezencev, N.
Ghesquière, Alain
Marney, P.
Combes, Marie-Christine
Guiderdoni, Emmanuel
author_sort Mezencev, N.
title Assessment of RAPD markers to detect genetic change in protoplast-derived rice plants
title_short Assessment of RAPD markers to detect genetic change in protoplast-derived rice plants
title_full Assessment of RAPD markers to detect genetic change in protoplast-derived rice plants
title_fullStr Assessment of RAPD markers to detect genetic change in protoplast-derived rice plants
title_full_unstemmed Assessment of RAPD markers to detect genetic change in protoplast-derived rice plants
title_sort assessment of rapd markers to detect genetic change in protoplast-derived rice plants
url http://agritrop.cirad.fr/389797/
work_keys_str_mv AT mezencevn assessmentofrapdmarkerstodetectgeneticchangeinprotoplastderivedriceplants
AT ghesquierealain assessmentofrapdmarkerstodetectgeneticchangeinprotoplastderivedriceplants
AT marneyp assessmentofrapdmarkerstodetectgeneticchangeinprotoplastderivedriceplants
AT combesmariechristine assessmentofrapdmarkerstodetectgeneticchangeinprotoplastderivedriceplants
AT guiderdoniemmanuel assessmentofrapdmarkerstodetectgeneticchangeinprotoplastderivedriceplants
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