Building multiple sequence alignments with a flavor of HSSP alignments.

Building multiple sequence alignments with a flavor of HSSP alignments.

The present study describes the processing used for building SH2QS as well as a comparison of the degree of residue conservation reported by SH2QS and HSSP. The comparison of the profiles from two alignments is also presented.

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Main Authors: HIGA, R. H., CRUZ, S. A. B. da, KUSER, P. R., YAMAGISHI, M. E. B., FILETO, R., OLIVEIRA, S. R. de M., MAZONI, I., SANTOS, E. H. dos, MANCINI, A. L., NESHICH, G.
Other Authors: ROBERTO HIROSHI HIGA, CNPTIA; SERGIO APARECIDO BRAGA DA CRUZ, CNPTIA; PAULA REGINA KUSER FALCAO, CNPTIA; MICHEL EDUARDO BELEZA YAMAGISHI, CNPTIA; RENATO FILETO; STANLEY ROBSON DE MEDEIROS OLIVEIRA, CNPTIA; IVAN MAZONI, CNPTIA; EDGARD HENRIQUE DOS SANTOS, CNPTIA; ADAUTO LUIZ MANCINI, CNPTIA; GORAN NESHICH, CNPTIA.
Format: Artigo de periódico biblioteca
Language:English
eng
Published: 2007-03-05
Subjects:Bioinformática, Estrutura secundária de proteínas, Sting, Multiple sequence alignment, Residue conservation, Relative entropy, Bioinformatics, Protein structure, Protein secondary structure,
Online Access:http://www.alice.cnptia.embrapa.br/alice/handle/doc/8262
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spelling dig-alice-doc-82622017-05-23T01:49:01Z Building multiple sequence alignments with a flavor of HSSP alignments. HIGA, R. H. CRUZ, S. A. B. da KUSER, P. R. YAMAGISHI, M. E. B. FILETO, R. OLIVEIRA, S. R. de M. MAZONI, I. SANTOS, E. H. dos MANCINI, A. L. NESHICH, G. ROBERTO HIROSHI HIGA, CNPTIA; SERGIO APARECIDO BRAGA DA CRUZ, CNPTIA; PAULA REGINA KUSER FALCAO, CNPTIA; MICHEL EDUARDO BELEZA YAMAGISHI, CNPTIA; RENATO FILETO; STANLEY ROBSON DE MEDEIROS OLIVEIRA, CNPTIA; IVAN MAZONI, CNPTIA; EDGARD HENRIQUE DOS SANTOS, CNPTIA; ADAUTO LUIZ MANCINI, CNPTIA; GORAN NESHICH, CNPTIA. Bioinformática Estrutura secundária de proteínas Sting Multiple sequence alignment Residue conservation Relative entropy Bioinformatics Protein structure Protein secondary structure The present study describes the processing used for building SH2QS as well as a comparison of the degree of residue conservation reported by SH2QS and HSSP. The comparison of the profiles from two alignments is also presented. 2011-04-10T11:11:11Z 2011-04-10T11:11:11Z 2007-03-05 2006 2017-05-22T11:11:11Z Artigo de periódico Genetics and Molecular Research, v. 5, n. 1, p. 127-137, 2006. http://www.alice.cnptia.embrapa.br/alice/handle/doc/8262 en eng openAccess
institution EMBRAPA
collection DSpace
country Brasil
countrycode BR
component Bibliográfico
access En linea
databasecode dig-alice
tag biblioteca
region America del Sur
libraryname Sistema de bibliotecas de EMBRAPA
language English
eng
topic Bioinformática
Estrutura secundária de proteínas
Sting
Multiple sequence alignment
Residue conservation
Relative entropy
Bioinformatics
Protein structure
Protein secondary structure
Bioinformática
Estrutura secundária de proteínas
Sting
Multiple sequence alignment
Residue conservation
Relative entropy
Bioinformatics
Protein structure
Protein secondary structure
spellingShingle Bioinformática
Estrutura secundária de proteínas
Sting
Multiple sequence alignment
Residue conservation
Relative entropy
Bioinformatics
Protein structure
Protein secondary structure
Bioinformática
Estrutura secundária de proteínas
Sting
Multiple sequence alignment
Residue conservation
Relative entropy
Bioinformatics
Protein structure
Protein secondary structure
HIGA, R. H.
CRUZ, S. A. B. da
KUSER, P. R.
YAMAGISHI, M. E. B.
FILETO, R.
OLIVEIRA, S. R. de M.
MAZONI, I.
SANTOS, E. H. dos
MANCINI, A. L.
NESHICH, G.
Building multiple sequence alignments with a flavor of HSSP alignments.
description The present study describes the processing used for building SH2QS as well as a comparison of the degree of residue conservation reported by SH2QS and HSSP. The comparison of the profiles from two alignments is also presented.
author2 ROBERTO HIROSHI HIGA, CNPTIA; SERGIO APARECIDO BRAGA DA CRUZ, CNPTIA; PAULA REGINA KUSER FALCAO, CNPTIA; MICHEL EDUARDO BELEZA YAMAGISHI, CNPTIA; RENATO FILETO; STANLEY ROBSON DE MEDEIROS OLIVEIRA, CNPTIA; IVAN MAZONI, CNPTIA; EDGARD HENRIQUE DOS SANTOS, CNPTIA; ADAUTO LUIZ MANCINI, CNPTIA; GORAN NESHICH, CNPTIA.
author_facet ROBERTO HIROSHI HIGA, CNPTIA; SERGIO APARECIDO BRAGA DA CRUZ, CNPTIA; PAULA REGINA KUSER FALCAO, CNPTIA; MICHEL EDUARDO BELEZA YAMAGISHI, CNPTIA; RENATO FILETO; STANLEY ROBSON DE MEDEIROS OLIVEIRA, CNPTIA; IVAN MAZONI, CNPTIA; EDGARD HENRIQUE DOS SANTOS, CNPTIA; ADAUTO LUIZ MANCINI, CNPTIA; GORAN NESHICH, CNPTIA.
HIGA, R. H.
CRUZ, S. A. B. da
KUSER, P. R.
YAMAGISHI, M. E. B.
FILETO, R.
OLIVEIRA, S. R. de M.
MAZONI, I.
SANTOS, E. H. dos
MANCINI, A. L.
NESHICH, G.
format Artigo de periódico
topic_facet Bioinformática
Estrutura secundária de proteínas
Sting
Multiple sequence alignment
Residue conservation
Relative entropy
Bioinformatics
Protein structure
Protein secondary structure
author HIGA, R. H.
CRUZ, S. A. B. da
KUSER, P. R.
YAMAGISHI, M. E. B.
FILETO, R.
OLIVEIRA, S. R. de M.
MAZONI, I.
SANTOS, E. H. dos
MANCINI, A. L.
NESHICH, G.
author_sort HIGA, R. H.
title Building multiple sequence alignments with a flavor of HSSP alignments.
title_short Building multiple sequence alignments with a flavor of HSSP alignments.
title_full Building multiple sequence alignments with a flavor of HSSP alignments.
title_fullStr Building multiple sequence alignments with a flavor of HSSP alignments.
title_full_unstemmed Building multiple sequence alignments with a flavor of HSSP alignments.
title_sort building multiple sequence alignments with a flavor of hssp alignments.
publishDate 2007-03-05
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/8262
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