Diversity and interactomics of bacterial communities associated with dominant trees during tropical forest recovery

Bacterial communities have been identified as functional key members in soil ecology. A deep relation with these communities maintains forest coverture. Trees harbor particular bacteriomes in the rhizosphere, endosphere, or phyllosphere, different from bulk-soil representatives. Moreover, the plant microbiome appears to be specific for the plant-hosting species, varies through season, and responsive to several environmental factors. This work reports the changes in bacterial communities associated with dominant pioneer trees [Tabebuia rosea and Handroanthus chrysanthus [(Bignoniaceae)] during tropical forest recovery chronosequence in the Mayan forest in Campeche, Mexico. Massive 16S sequencing approach leads to identifying phylotypes associated with rhizosphere, bulk-soil, or recovery stage. Lotka–Volterra interactome modeling suggests the presence of putative regulatory roles of some phylotypes over the rest of the community. Our results may indicate that bacterial communities associated with pioneer trees may establish more complex regulatory networks than those found in bulk-soil. Moreover, modeled regulatory networks predicted from rhizosphere samples resulted in a higher number of nodes and interactions than those found in the analysis of bulk-soil samples.

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Main Authors: Becerra Lucio, Ángel Antonio Maestro autor 21929, Labrín Sotomayor, Natalia Ysabel Maestra autora 21640, Becerra Lucio, Patricia Alejandra Maestra autora 21361, Trujillo Elisea, Flor Itzel Maestra autora 20589, Chávez Bárcenas, ‪Ana Tztzqui autora, Machkour M'Rabet, Salima Doctora autora 12330, Peña Ramírez, Yuri Jorge Jesús Doctor autor 12328
Format: Texto biblioteca
Language:eng
Subjects:Tabebuia rosea, Handroanthus chrysanthus, Rizosfera, Bacterias del suelo, Recuperación de tierras, Bosques tropicales, Ecología de suelos, Artfrosur,
Online Access:https://doi.org/10.1007/s00284-021-02603-9
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spelling KOHA-OAI-ECOSUR:612792024-03-12T12:34:55ZDiversity and interactomics of bacterial communities associated with dominant trees during tropical forest recovery Becerra Lucio, Ángel Antonio Maestro autor 21929 Labrín Sotomayor, Natalia Ysabel Maestra autora 21640 Becerra Lucio, Patricia Alejandra Maestra autora 21361 Trujillo Elisea, Flor Itzel Maestra autora 20589 Chávez Bárcenas, ‪Ana Tztzqui autora Machkour M'Rabet, Salima Doctora autora 12330 Peña Ramírez, Yuri Jorge Jesús Doctor autor 12328 textengBacterial communities have been identified as functional key members in soil ecology. A deep relation with these communities maintains forest coverture. Trees harbor particular bacteriomes in the rhizosphere, endosphere, or phyllosphere, different from bulk-soil representatives. Moreover, the plant microbiome appears to be specific for the plant-hosting species, varies through season, and responsive to several environmental factors. This work reports the changes in bacterial communities associated with dominant pioneer trees [Tabebuia rosea and Handroanthus chrysanthus [(Bignoniaceae)] during tropical forest recovery chronosequence in the Mayan forest in Campeche, Mexico. Massive 16S sequencing approach leads to identifying phylotypes associated with rhizosphere, bulk-soil, or recovery stage. Lotka–Volterra interactome modeling suggests the presence of putative regulatory roles of some phylotypes over the rest of the community. Our results may indicate that bacterial communities associated with pioneer trees may establish more complex regulatory networks than those found in bulk-soil. Moreover, modeled regulatory networks predicted from rhizosphere samples resulted in a higher number of nodes and interactions than those found in the analysis of bulk-soil samples.Bacterial communities have been identified as functional key members in soil ecology. A deep relation with these communities maintains forest coverture. Trees harbor particular bacteriomes in the rhizosphere, endosphere, or phyllosphere, different from bulk-soil representatives. Moreover, the plant microbiome appears to be specific for the plant-hosting species, varies through season, and responsive to several environmental factors. This work reports the changes in bacterial communities associated with dominant pioneer trees [Tabebuia rosea and Handroanthus chrysanthus [(Bignoniaceae)] during tropical forest recovery chronosequence in the Mayan forest in Campeche, Mexico. Massive 16S sequencing approach leads to identifying phylotypes associated with rhizosphere, bulk-soil, or recovery stage. Lotka–Volterra interactome modeling suggests the presence of putative regulatory roles of some phylotypes over the rest of the community. Our results may indicate that bacterial communities associated with pioneer trees may establish more complex regulatory networks than those found in bulk-soil. Moreover, modeled regulatory networks predicted from rhizosphere samples resulted in a higher number of nodes and interactions than those found in the analysis of bulk-soil samples.Tabebuia roseaHandroanthus chrysanthusRizosferaBacterias del sueloRecuperación de tierrasBosques tropicalesEcología de suelosArtfrosurArtfrosurCurrent Microbiologyhttps://doi.org/10.1007/s00284-021-02603-9Disponible para usuarios de ECOSUR con su clave de acceso
institution ECOSUR
collection Koha
country México
countrycode MX
component Bibliográfico
access En linea
En linea
databasecode cat-ecosur
tag biblioteca
region America del Norte
libraryname Sistema de Información Bibliotecario de ECOSUR (SIBE)
language eng
topic Tabebuia rosea
Handroanthus chrysanthus
Rizosfera
Bacterias del suelo
Recuperación de tierras
Bosques tropicales
Ecología de suelos
Artfrosur
Artfrosur
Tabebuia rosea
Handroanthus chrysanthus
Rizosfera
Bacterias del suelo
Recuperación de tierras
Bosques tropicales
Ecología de suelos
Artfrosur
Artfrosur
spellingShingle Tabebuia rosea
Handroanthus chrysanthus
Rizosfera
Bacterias del suelo
Recuperación de tierras
Bosques tropicales
Ecología de suelos
Artfrosur
Artfrosur
Tabebuia rosea
Handroanthus chrysanthus
Rizosfera
Bacterias del suelo
Recuperación de tierras
Bosques tropicales
Ecología de suelos
Artfrosur
Artfrosur
Becerra Lucio, Ángel Antonio Maestro autor 21929
Labrín Sotomayor, Natalia Ysabel Maestra autora 21640
Becerra Lucio, Patricia Alejandra Maestra autora 21361
Trujillo Elisea, Flor Itzel Maestra autora 20589
Chávez Bárcenas, ‪Ana Tztzqui autora
Machkour M'Rabet, Salima Doctora autora 12330
Peña Ramírez, Yuri Jorge Jesús Doctor autor 12328
Diversity and interactomics of bacterial communities associated with dominant trees during tropical forest recovery
description Bacterial communities have been identified as functional key members in soil ecology. A deep relation with these communities maintains forest coverture. Trees harbor particular bacteriomes in the rhizosphere, endosphere, or phyllosphere, different from bulk-soil representatives. Moreover, the plant microbiome appears to be specific for the plant-hosting species, varies through season, and responsive to several environmental factors. This work reports the changes in bacterial communities associated with dominant pioneer trees [Tabebuia rosea and Handroanthus chrysanthus [(Bignoniaceae)] during tropical forest recovery chronosequence in the Mayan forest in Campeche, Mexico. Massive 16S sequencing approach leads to identifying phylotypes associated with rhizosphere, bulk-soil, or recovery stage. Lotka–Volterra interactome modeling suggests the presence of putative regulatory roles of some phylotypes over the rest of the community. Our results may indicate that bacterial communities associated with pioneer trees may establish more complex regulatory networks than those found in bulk-soil. Moreover, modeled regulatory networks predicted from rhizosphere samples resulted in a higher number of nodes and interactions than those found in the analysis of bulk-soil samples.
format Texto
topic_facet Tabebuia rosea
Handroanthus chrysanthus
Rizosfera
Bacterias del suelo
Recuperación de tierras
Bosques tropicales
Ecología de suelos
Artfrosur
Artfrosur
author Becerra Lucio, Ángel Antonio Maestro autor 21929
Labrín Sotomayor, Natalia Ysabel Maestra autora 21640
Becerra Lucio, Patricia Alejandra Maestra autora 21361
Trujillo Elisea, Flor Itzel Maestra autora 20589
Chávez Bárcenas, ‪Ana Tztzqui autora
Machkour M'Rabet, Salima Doctora autora 12330
Peña Ramírez, Yuri Jorge Jesús Doctor autor 12328
author_facet Becerra Lucio, Ángel Antonio Maestro autor 21929
Labrín Sotomayor, Natalia Ysabel Maestra autora 21640
Becerra Lucio, Patricia Alejandra Maestra autora 21361
Trujillo Elisea, Flor Itzel Maestra autora 20589
Chávez Bárcenas, ‪Ana Tztzqui autora
Machkour M'Rabet, Salima Doctora autora 12330
Peña Ramírez, Yuri Jorge Jesús Doctor autor 12328
author_sort Becerra Lucio, Ángel Antonio Maestro autor 21929
title Diversity and interactomics of bacterial communities associated with dominant trees during tropical forest recovery
title_short Diversity and interactomics of bacterial communities associated with dominant trees during tropical forest recovery
title_full Diversity and interactomics of bacterial communities associated with dominant trees during tropical forest recovery
title_fullStr Diversity and interactomics of bacterial communities associated with dominant trees during tropical forest recovery
title_full_unstemmed Diversity and interactomics of bacterial communities associated with dominant trees during tropical forest recovery
title_sort diversity and interactomics of bacterial communities associated with dominant trees during tropical forest recovery
url https://doi.org/10.1007/s00284-021-02603-9
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