​Comparative genomics of Balto, a famous historic dog, captures lost diversity of 1920s sled dogs

by Moon, Katherine L., Huson, Heather J., Morrill, Kathleen, Wang, Ming-Shan, Li, Xue, Srikanth, Krishnamoorthy, Zoonomia Consortium, Juan, David, Marqués-Bonet, Tomàs, Muntané, Gerard, Navarro, Arcadi, Serres-Armero, Aitor, Valenzuela, Alejandro, Lindblad-Toh, Kerstin, Svenson, Gavin J., Karlsson, Elinor K., Shapiro, Beth
Published 2023-04-28

Supplementary Materials for Comparative genomics of Balto, a famous historic dog, captures lost diversity of 1920s sled dogs

by Moon, Katherine L., Huson, Heather J., Morrill, Kathleen, Wang, Ming-Shan, Li, Xue, Srikanth, Krishnamoorthy, Zoonomia Consortium, Juan, David, Marqués-Bonet, Tomàs, Muntané, Gerard, Navarro, Arcadi, Serres-Armero, Aitor, Valenzuela, Alejandro, Lindblad-Toh, Kerstin, Svenson, Gavin J., Karlsson, Elinor K., Shapiro, Beth
Published 2023-04-28

The contribution of historical processes to contemporary extinction risk in placental mammals

by Wilder, Aryn P., Supple, Megan A., Subramanian, Ayshwarya, Mudide, Anish, Swofford, Ross, Serres-Armero, Aitor, Steiner, Cynthia, Koepfli, Klaus-Peter, Genereux, Diane P., Karlsson, Elinor K., Lindblad-Toh, Kerstin, Marqués-Bonet, Tomàs, Muñoz-Fuentes, Violeta, Foley, Kathleen, Meyer, Wynn K., Zoonomia Consortium, Juan, David, Muntané, Gerard, Navarro, Arcadi, Valenzuela, Alejandro, Ryder, Oliver A., Shapiro, Beth
Published 2023-04-28

Ancient and modern genomes unravel the evolutionary history of the rhinoceros family

by Liu, Shanlin, Westbury, Michael V., Dussex, Nicolas, Mitchell, Kieren J., Sinding, Mikkel-Holger S., Heintzman, Peter D., Duchêne, David A., Kapp, Joshua D., von Seth, Johanna, Heiniger, Holly, Sánchez-Barreiro, Fátima, Margaryan, Ashot, André-Olsen, Remi, Cahsan, Binia de, Meng, Guanliang, Yang, Chentao, Chen, Lei, van der Valk, Tom, Moodley, Yoshan, Rookmaaker, Kees, Bruford, Michael W., Ryder, Oliver A., Steiner, Cynthia C., Bruins-van Sonsbeek, Linda G. R., Vartanyan, Sergey, Guo, Chunxue, Cooper, Alan, Kosintsev, Pavel, Kirillova, Irina, Lister, Adrian M., Marqués-Bonet, Tomàs, Gopalakrishnan, Shyam, Dunn, Robert R., Lorenzen, Eline D., Shapiro, Beth, Zhang, Guojie, Antoine, Pierre-Olivier, Dalén, Love, Gilbert, M. Thomas P.
Published 2021-09-16

Large-scale genomic analysis reveals the genetic cost of chicken domestication

by Wang, Ming Shan, Zhang, Jin Jin, Guo, Xing, Li, Ming, Meyer, Rachel, Ashari, Hidayat, Zheng, Zhu Qing, Wang, Sheng, Peng, Min Sheng, Jiang, Yu, Thakur, Mukesh, Suwannapoom, Chatmongkon, Esmailizadeh, Ali, Hirimuthugoda, Nalini Yasoda, Zein, Moch Syamsul Arifin, Kusza, Szilvia, Kharrati-Koopaee, Hamed, Zeng, Lin, Wang, Yun Mei, Yin, Ting Ting, Yang, Min Min, Li, Ming Li, Lu, Xue Mei, Lasagna, Emiliano, Ceccobelli, Simone, Gunwardana, Humpita Gamaralalage Thilini Nisanka, Senasig, Thilina Madusanka, Feng, Shao Hong, Zhang, Hao, Bhuiyan, Abul Kashem Fazlul Haque, Khan, Muhammad Sajjad, Silva, Gamamada Liyanage Lalanie Pradeepa, Thuy, Le Thi, Mwai, Okeyo A., Ibrahim, Mohamed Nawaz Mohamed, Zhang, Guojie, Qu, Kai Xing, Hanotte, Olivier, Shapiro, Beth, Bosse, Mirte, Wu, Dong Dong, Han, Jian Lin, Zhang, Ya Ping

A comparative genomics multitool for scientific discovery and conservation

by Genereux, Diane P., Serres-Armero, Aitor, Armstrong, Joel, Johnson, Jeremy, Marinescu, Voichita D., Murén, Eva, Juan, David, Bejerano, Gill, Casewell, Nicholas R., Chemnick, Leona G., Damas, Joana, Di Palma, Federica, Diekhans, Mark, Fiddes, Ian T., Garber, Manuel, Gladyshev, Vadim N., Goodman, Linda, Haerty, Wilfried, Houck, Marlys L., Hubley, Robert, Kivioja, Teemu, Koepfli, Klaus-Peter, Kuderna, Lukas F. K., Lander, Eric S., Meadows, Jennifer R.S., Murphy, William J., Nash, Will, Noh, Hyun Ji, Nweeia, Martin, Pfenning, Andreas R., Pollard, Katherine S., Ray, David A., Shapiro, Beth, Smit, Arian F. A., Springer, Mark S., Steiner, Cynthia C., Swofford, Ross, Taipale, Jussi, Teeling, Emma C., Turner-Maier, Jason, Alfoldi, Jessica, Birren, Bruce, Ryder, Oliver A., Lewin, Harris A., Paten, Benedict, Marqués-Bonet, Tomàs, Lindblad-Toh, Kerstin, Karlsson, Elinor K.
Published 2020-11-12

Evolutionary constraint and innovation across hundreds of placental mammals

by Christmas, Matthew J., Kaplow, Irene M., Genereux, Diane P., Dong, Michael X., Hughes, Graham M., Li, Xue, Sullivan, Patrick F., Hindle, Allyson G., Andrews,Gregory, Armstrong, Joel C., Bianchi, Matteo, Breit, Ana M., Diekhans, Mark, Fanter, Cornelia, Foley, Nicole M., Goodman, Daniel B., Goodman, Linda, Keough, Kathleen C., Kirilenko, Bogdan, Kowalczyk, Amanda, Lawless, Colleen, Lind, Abigail L., Meadows, Jennifer R. S., Moreira, Lucas R., Redlich, Ruby W., Ryan, Louise, Swofford, Ross, Valenzuela, Alejandro, Wagner, Franziska, Wallerman, Ola, Brown, Ashley R., Damas, Joana, Fan, Kaili, Gatesy, John, Grimshaw, Jenna, Johnson, Jeremy, Kozyrev, Sergey V., Lawler, Alyssa J., Marinescu, Voichita D., Morrill, Kathleen M., Osmanski, Austin, Paulat, Nicole S., Phan, Badoi N., Reilly, Steven K., Schäffer, Daniel E., Steiner, Cynthia, Supple, Megan A., Wilder, Aryn P., Wirthlin, Morgan E., Xue, James R., Zoonomia Consortium, Birren, Bruce W., Gazal, Steven, Hubley, Robert M., Koepfli, Klaus-Peter, Marqués-Bonet, Tomàs, Meyer, Wynn K., Nweeia, Martin, Sabeti, Pardis C., Shapiro, Beth, Smit, Arian F. A., Springer, Mark S., Teeling, Emma C., Weng, Zhiping, Hiller, Michael, Levesque, Danielle L., Lewin, Harris A., Murphy, William J., Navarro, Arcadi, Paten, Benedict, Pollard, Katherine S., Ray, David A., Ruf, Irina, Ryder, Oliver A., Pfenning , Andreas R., Lindblad-Toh, Kerstin, Karlsson, Elinor K.
Published 2023-04-28

Tracking Five Millennia of Horse Management with Extensive Ancient Genome Time Series

by Fages, Antoine, Hanghøj, Kristian, Khan, Naveed, Gaunitz, Charleen, Seguin-Orlando, Andaine, Leonardi, Michela, McCrory Constantz, Christian, Gamba, Cristina, Al-Rasheid, Khaled A.S., Albizuri, Silvia, Alfarhan, Ahmed, Vahdati, Ali, Valenzuela-Lamas, Silvia, Viegas, Catarina, Wallner, Barbara, Weinstock, Jaco, Allentoft, Morten, Zaibert, Victor, Clavel, Benoit, Lepetz, Sébastien, Mashkour, Marjan, Bayarsaikhan, Jamsranjav, Helgason, Agnar, Stefánsson, Kári, Barrey, Eric, Willerslev, Eske, Outram, Alan K., Librado, Pablo, Alquraishi, Saleh, Orlando, Ludovic, Anthony, David, Baimukhanov, Nurbol, Benecke, Norbert, Barrett, James H., Bernáldez-Sánchez, E., Berrocal-Rangel, Luis, Biglari, Fereidoun, Boessenkool, Sanne, Boldgiv, Bazartseren, Brem, Gottfried, Brown, Dorcas, Burger, Joachim, Erdenebaatar, Diimaajav, Crubézy, Eric, Daugnora, Linas, Davoudi, Hossein, Barros Damgaard, Peter de, Chorro y de Villa-Ceballos, María de los Ángeles de, Deschler-Erb, Sabine, Detry, Cleia, Dill, Nadine, Oom, Maria do Mar, Dohr, Anna, Fathi, Homa, Ellingvåg, Sturla, Felkel, Sabine, Fernández-Rodríguez, Carlos, García-Viñas, E., Germonpré, M., Granado, José D., Hallsson, Jón H., Hemmer, Helmut, Hofreiter, Michael, Lettow-Vorbeck, Corina Liesau von, Kasparov, Aleksei, Khasanov, Mutalib, Khazaeli, Roya, Kosintsev, Pavel, Kristiansen, Kristian, Kubatbek,Tabaldiev, Kuderna, Lukas F. K., Kuznetsov, Pavel, Laleh, Haeedeh, Leonard, Jennifer A., Logvin, Andrey, Lhuillier, Johanna, Lõugas, Lembi, Ludwig, Arne, Luis, Cristina, Arruda, Ana Margarida, Marqués-Bonet, Tomàs, Matoso Silva, Raquel, Merz, Victor, Mijiddorj, Enkhbayar, Rajic Sikanjic, Petra, Miller, Bryan K., Monchalov, Oleg, Mohaseb, Fatemeh A., Morales, Arturo, Nieto-Espinet, Ariadna, Nistelberger, Heidi, Onar, Vedat, Pálsdóttir, Albína H., Pitulko, Vladimir, Pitskhelauri, Konstantin, Rapan Papeša, Anita, Pruvost, Mélanie, Roslyakova, Natalia, Sardari, Alireza, Sauer, Eberhard, Schafberg, Renate, Scheu, Amelie, Schibler, Jörg, Schlumbaum, Angela, Serrand, Nathalie, Trbojević Vukičević, Tajana, Serres-Armero, Aitor, Shapiro, Beth, Seno, Shiva Sheikhi, Shevnina, Irina, Shidrang, Sonia, Southon, John, Star, Bastiaan, Sykes, Naomi, Taheri, Kamal, Taylor, William, Trixl, Simon, Teegen, Wolf-Rüdiger, Tumen, Dashzeveg, Undrakhbold, Sainbileg, Usmanova, Emma
Published 2019

Towards complete and error-free genome assemblies of all vertebrate species

by Rhie, Arang, McCarthy, Shane A., Fedrigo, Olivier, Damas, Joana, Formenti, Giulio, Koren, Sergey, Uliano-Silva, Marcela, Chow, William, Fungtammasan, Arkarachai, Kim, Juwan, Lee, Chul, Haase, Bettina, Mountcastle, Jacquelyn, Winkler, Sylke, Paez, Sadye, Howard, Jason, Vernes, Sonja C, Lama, Tanya M, Grützner, Frank, Warren, Wesley C., Balakrishnan, Christopher N., Pippel, Martin, Burt, Dave, George, Julia M., Biegler, Matthew T., Iorns, David, Digby, Andrew, Eason, Daryl, Robertson, Bruce, Edwards, Taylor, Wilkinson, Mark, Turner, George, Malinsky, Milan, Meyer, Axel, Kautt, Andreas F., Franchini, Paolo, Detrich III, H. William, Svardal, Hannes, Wagner, Maximilian, Naylor, Gavin J. P., Mooney, Mark, Simbirsky, Maria, Hannigan, Brett T., Pesout, Trevor, Houck, Marlys L., Misuraca, Ann, Kingan, Sarah B., Hall, Richard, Wood, Jonathan, Kronenberg, Zev, Sović, Ivan, Dunn, Christopher, Ning, Zemin, Hastie, Alex, Lee, Joyce, Selvaraj, Siddarth, Green, Richard E., Putnam, Nicholas H., Gut, Ivo, Dagnew, Robel E., Ghurye, Jay, Garrison, Erik, Sims, Ying, Collins, Joanna, Pelan, Sarah, Torrance, James, Tracey, Alan, Guan, Dengfeng, London, Sarah E., Clayton, David F., Mello, Claudio V., Friedrich, Samantha R., Lovell, Peter V., Osipova, Ekaterina, Al-Ajli, Farooq O., Diekhans, Mark, Secomandi, Simona, Kim, Heebal, Theofanopoulou, Constantina, Hiller, Michael, Zhou, Yang, Harris, Robert S., Makova, Kateryna D., Medvedev, Paul, Hoffman, Jinna, Masterson, Patrick, Nassar, Luis, Clark, Karen, Martin, Fergal, Howe, Kevin, Flicek, Paul, Walenz, Brian P., Kwak, Woori, Clawson, Hiram, Paten, Benedict, Kraus, Robert H. S., Crawford, Andrew J., Gilbert, M. Thomas P., Zhang, Guojie, Venkatesh, Byrappa, Murphy, Robert W., Koepfli, Klaus-Peter, Ko, Byung June, Shapiro, Beth, Johnson, Warren E., Di Palma, Federica, Marqués-Bonet, Tomàs, Teeling, Emma C., Warnow, Tandy, Marshall Graves, Jennifer, Ryder, Oliver A., Haussler, David, O’Brien, Stephen J., Chaisson, Mark, Korlach, Jonas, Lewin, Harris A., Howe, Kerstin, Myers, Eugene W., Durbin, Richard, Phillippy, Adam M., Jarvis, Erich D., Gedman, Gregory L., Cantin, Lindsey J., Thibaud-Nissen, Francoise, Haggerty, Leanne, Bista, Iliana, Smith, Michelle
Published 2021-04-29