NPClassifier: A Deep Neural Network-Based Structural Classification Tool for Natural Products

by Kim, Hyun Woo, Wang, Mingxun, Leber, Christopher A., Nothias, Louis Félix, Reher, Raphael, Kang, Kyo Bin, Van Der Hooft, Justin J.J., Dorrestein, Pieter C., Gerwick, William H., Cottrell, Garrison W.

NPOmix 1: antiSMASH results from 1,040 PoDP paired samples

by Leao, Tiago F., Wang, Mingxun, Silva, Ricardo, Gurevich, Alexey, Bauermeister, Anelize, Gomes, Paulo W.P., Brejnrod, Asker, Glukhov, Evgenia, Aron, Allegra T., Louwen, Joris, Kim, Hyun Woo, Reher, Raphael, Fiore, Marli F., van der Hooft, Justin, Gerwick, Lena, Gerwick, William H., Bandeira, Nuno, Dorrestein, Pieter C.

NPOmix: A machine learning classifier to connect mass spectrometry fragmentation data to biosynthetic gene clusters

by Leão, Tiago F., Wang, Mingxun, da Silva, Ricardo, Gurevich, Alexey, Bauermeister, Anelize, Gomes, Paulo Wender P., Brejnrod, Asker, Glukhov, Evgenia, Aron, Allegra T., Louwen, Joris J.R., Kim, Hyun Woo, Reher, Raphael, Fiore, Marli F., van der Hooft, Justin J.J., Gerwick, Lena, Gerwick, William H., Bandeira, Nuno, Dorrestein, Pieter C.

Open access repository-scale propagated nearest neighbor suspect spectral library for untargeted metabolomics

by Bittremieux, Wout, Avalon, Nicole E., Thomas, Sydney P., Kakhkhorov, Sarvar A., Aksenov, Alexander A., Gomes, Paulo Wender P., Aceves, Christine M., Caraballo-Rodríguez, Andrés Mauricio, Gauglitz, Julia M., Gerwick, William H., Huan, Tao, Jarmusch, Alan K., Kaddurah-Daouk, Rima F., Kang, Kyo Bin, Kim, Hyun Woo, Kondić, Todor, Mannochio-Russo, Helena, Meehan, Michael J., Melnik, Alexey V., Nothias, Louis Felix, O’Donovan, Claire, Panitchpakdi, Morgan, Petras, Daniel, Schmid, Robin, Schymanski, Emma L., van der Hooft, Justin J.J., Weldon, Kelly C., Yang, Heejung, Xing, Shipei, Zemlin, Jasmine, Wang, Mingxun, Dorrestein, Pieter C.

Artificial intelligence for natural product drug discovery

by Mullowney, Michael W., Duncan, Katherine R., Elsayed, Somayah S., Garg, Neha, van der Hooft, Justin J.J., Martin, Nathaniel I., Meijer, David, Terlouw, Barbara R., Biermann, Friederike, Blin, Kai, Durairaj, Janani, Gorostiola González, Marina, Helfrich, Eric J.N., Huber, Florian, Leopold-Messer, Stefan, Rajan, Kohulan, de Rond, Tristan, van Santen, Jeffrey A., Sorokina, Maria, Balunas, Marcy J., Beniddir, Mehdi A., van Bergeijk, Doris A., Carroll, Laura M., Clark, Chase M., Clevert, Djork Arné, Dejong, Chris A., Du, Chao, Ferrinho, Scarlet, Grisoni, Francesca, Hofstetter, Albert, Jespers, Willem, Kalinina, Olga V., Kautsar, Satria A., Kim, Hyunwoo, Leao, Tiago F., Masschelein, Joleen, Rees, Evan R., Reher, Raphael, Reker, Daniel, Schwaller, Philippe, Segler, Marwin, Skinnider, Michael A., Walker, Allison S., Willighagen, Egon L., Zdrazil, Barbara, Ziemert, Nadine, Goss, Rebecca J.M., Guyomard, Pierre, Volkamer, Andrea, Gerwick, William H., Kim, Hyun Uk, Müller, Rolf, van Wezel, Gilles P., van Westen, Gerard J.P., Hirsch, Anna K.H., Linington, Roger G., Robinson, Serina L., Medema, Marnix H.

Minimum Information about a Biosynthetic Gene cluster

by Medema, M.H., Kottmann, Renzo, Yilmaz, Pelin, Cummings, Matthew, Biggins, J.B., Blin, Kai, De Bruijn, Irene, Chooi, Yit Heng, Claesen, Jan, Coates, R.C., Cruz-Morales, Pablo, Duddela, Srikanth, Düsterhus, Stephanie, Edwards, Daniel J., Fewer, David P., Garg, Neha, Geiger, Christoph, Gomez-Escribano, Juan Pablo, Greule, Anja, Hadjithomas, Michalis, Haines, Anthony S., Helfrich, Eric J.N., Hillwig, Matthew L., Ishida, Keishi, Jones, Adam C., Jones, Carla S., Jungmann, Katrin, Kegler, Carsten, Kim, Hyun Uk, Kötter, Peter, Krug, Daniel, Masschelein, Joleen, Melnik, Alexey V., Mantovani, Simone M., Monroe, Emily A., Moore, Marcus, Moss, Nathan, Nützmann, Hans Wilhelm, Pan, Guohui, Pati, Amrita, Petras, Daniel, Reen, F.J., Rosconi, Federico, Rui, Zhe, Tian, Zhenhua, Tobias, Nicholas J., Tsunematsu, Yuta, Wiemann, Philipp, Wyckoff, Elizabeth, Yan, Xiaohui, Yim, Grace, Yu, Fengan, Xie, Yunchang, Aigle, Bertrand, Apel, Alexander K., Balibar, Carl J., Balskus, Emily P., Barona-Gómez, Francisco, Bechthold, Andreas, Bode, Helge B., Borriss, Rainer, Brady, Sean F., Brakhage, Axel A., Caffrey, Patrick, Cheng, Yi Qiang, Clardy, Jon, Cox, Russell J., De Mot, René, Donadio, Stefano, Donia, Mohamed S., Van Der Donk, Wilfred A., Dorrestein, Pieter C., Doyle, Sean, Driessen, Arnold J.M., Ehling-Schulz, Monika, Entian, Karl Dieter, Fischbach, Michael A., Gerwick, Lena, Gerwick, William H., Gross, Harald, Gust, Bertolt, Hertweck, Christian, Höfte, Monica, Jensen, Susan E., Ju, Jianhua, Katz, Leonard, Kaysser, Leonard, Klassen, Jonathan L., Keller, Nancy P., Kormanec, Jan, Kuipers, Oscar P., Kuzuyama, Tomohisa, Kyrpides, Nikos C., Kwon, Hyung Jin, Lautru, Sylvie, Lavigne, Rob, Lee, Chia Y., Linquan, Bai, Liu, Xinyu, Liu, Wen, Luzhetskyy, Andriy, Mahmud, Taifo, Mast, Yvonne, Méndez, Carmen, Metsä-Ketelä, Mikko, Micklefield, Jason, Mitchell, Douglas A., Moore, Bradley S., Moreira, Leonilde M., Müller, Rolf, Neilan, Brett A., Nett, Markus, Nielsen, Jens, O'Gara, Fergal, Oikawa, Hideaki, Osbourn, Anne, Osburne, Marcia S., Ostash, Bohdan, Payne, Shelley M., Pernodet, Jean Luc, Petricek, Miroslav, Piel, Jörn, Ploux, Olivier, Raaijmakers, Jos M., Salas, José A., Schmitt, Esther K., Scott, Barry, Seipke, Ryan F., Shen, Ben, Sherman, David H., Sivonen, Kaarina, Smanski, Michael J., Sosio, Margherita, Stegmann, Evi, Süssmuth, Roderich D., Tahlan, Kapil, Thomas, Christopher M., Tang, Yi, Truman, Andrew W., Viaud, Muriel, Walton, Jonathan D., Walsh, Christopher T., Weber, Tilmann, Van Wezel, Gilles P., Wilkinson, Barrie, Willey, Joanne M., Wohlleben, Wolfgang, Wright, Gerard D., Ziemert, Nadine, Zhang, Changsheng, Zotchev, Sergey B., Breitling, Rainer, Takano, Eriko, Glöckner, Frank Oliver